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01/28/2022
The Complexity of Approximate Pattern Matching on De Bruijn Graphs
Aligning a sequence to a walk in a labeled graph is a problem of fundame...
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07/27/2019
Efficient Architecture-Aware Acceleration of BWA-MEM for Multicore Systems
Innovations in Next-Generation Sequencing are enabling generation of DNA...
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06/01/2019
Cooperative neural networks (CoNN): Exploiting prior independence structure for improved classification
We propose a new approach, called cooperative neural networks (CoNN), wh...
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04/12/2017
Parallelized Kendall's Tau Coefficient Computation via SIMD Vectorized Sorting On Many-Integrated-Core Processors
Pairwise association measure is an important operation in data analytics...
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08/07/2014