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07/19/2023
An Operator-Splitting Approach for Variational Optimal Control Formulations for Diffeomorphic Shape Matching
We present formulations and numerical algorithms for solving diffeomorph...
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11/04/2022
Automatic classification of deformable shapes
Let 𝒟 be a dataset of smooth 3D-surfaces, partitioned into disjoint clas...
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09/16/2022
CLAIRE – Parallelized Diffeomorphic Image Registration for Large-Scale Biomedical Imaging Applications
We study the performance of CLAIRE – a diffeomorphic multi-node, multi-G...
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04/27/2021
Stochastic Neural Networks for Automatic Cell Tracking in Microscopy Image Sequences of Bacterial Colonies
We describe an automated analysis method to quantify the detailed growth...
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08/28/2020
Multi-Node Multi-GPU Diffeomorphic Image Registration for Large-Scale Imaging Problems
We present a Gauss-Newton-Krylov solver for large deformation diffeomorp...
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04/19/2020
Fast GPU 3D Diffeomorphic Image Registration
3D image registration is one of the most fundamental and computationally...
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08/13/2018
CLAIRE: A distributed-memory solver for constrained large deformation diffeomorphic image registration
We introduce CLAIRE, a distributed-memory algorithm and software for sol...
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02/28/2018
PDE-constrained optimization in medical image analysis
PDE-constrained optimization problems find many applications in medical ...
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03/13/2017
A Lagrangian Gauss-Newton-Krylov Solver for Mass- and Intensity-Preserving Diffeomorphic Image Registration
We present an efficient solver for diffeomorphic image registration prob...
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08/11/2016
Distributed-memory large deformation diffeomorphic 3D image registration
We present a parallel distributed-memory algorithm for large deformation...
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04/07/2016
A Semi-Lagrangian two-level preconditioned Newton-Krylov solver for constrained diffeomorphic image registration
We propose an efficient numerical algorithm for the solution of diffeomo...
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03/02/2015
Constrained H^1-regularization schemes for diffeomorphic image registration
We propose regularization schemes for deformable registration and effici...
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08/27/2014